Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC36Q8IYA8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC36Q8IYA8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC36Q8IYA8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC36Q8IYA8 SMG8-203ENST00000578922 2178 ntBASIC17.42■□□□□ 0.38
CCDC36Q8IYA8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 AL162377.1-201ENST00000618844 1793 ntBASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC36Q8IYA8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AC008403.3-201ENST00000598924 454 ntBASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 BX119927.1-201ENST00000636596 1552 ntBASIC17.4■□□□□ 0.38
CCDC36Q8IYA8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC36Q8IYA8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CCDC36Q8IYA8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC36Q8IYA8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC36Q8IYA8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 RPS2P52-201ENST00000469610 820 ntBASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 AL121829.2-201ENST00000620908 328 ntBASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 AL121906.2-201ENST00000621597 723 ntBASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC36Q8IYA8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC36Q8IYA8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms