Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD2Q8IV50 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 AC126544.1-201ENST00000580842 1059 ntBASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 AL035685.1-201ENST00000636663 812 ntBASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 AC141586.5-201ENST00000624546 2050 ntBASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LYSMD2Q8IV50 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 ABALON-201ENST00000629058 1903 ntBASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 RARRES2P11-201ENST00000635158 484 ntBASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 AC105233.4-201ENST00000642045 216 ntBASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.1■□□□□ 0.33
LYSMD2Q8IV50 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 FP475955.4-201ENST00000623131 1990 ntBASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LYSMD2Q8IV50 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms