Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FSCN1P1-201ENST00000568912 1481 ntBASIC20.69■□□□□ 0.9
RNF135Q8IUD6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF135Q8IUD6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 FAM87A-204ENST00000613235 858 ntBASIC20.68■□□□□ 0.9
RNF135Q8IUD6 MIR2861-201ENST00000636310 90 ntBASIC20.68■□□□□ 0.9
RNF135Q8IUD6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RNF135Q8IUD6 AC073130.3-201ENST00000624389 2278 ntBASIC20.67■□□□□ 0.9
RNF135Q8IUD6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 RNF152P1-201ENST00000397754 604 ntBASIC20.67■□□□□ 0.9
RNF135Q8IUD6 MESTP1-201ENST00000404287 994 ntBASIC20.67■□□□□ 0.9
RNF135Q8IUD6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF135Q8IUD6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 INGX-201ENST00000359239 846 ntBASIC20.66■□□□□ 0.9
RNF135Q8IUD6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 AC139887.4-201ENST00000607877 719 ntBASIC20.66■□□□□ 0.9
RNF135Q8IUD6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF135Q8IUD6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 AC007225.1-201ENST00000566331 1836 ntBASIC20.65■□□□□ 0.9
RNF135Q8IUD6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 LINC01006-201ENST00000333319 2292 ntBASIC20.65■□□□□ 0.9
RNF135Q8IUD6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF135Q8IUD6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF135Q8IUD6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF135Q8IUD6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms