Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF111Q6ZNA4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 AC142086.2-201ENST00000569753 217 ntBASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 AL133373.2-201ENST00000623187 2828 ntBASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF111Q6ZNA4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF111Q6ZNA4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 DPP3P2-201ENST00000416030 1696 ntBASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 AC133041.1-202ENST00000642053 222 ntBASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 AC018470.1-201ENST00000624790 3129 ntBASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF111Q6ZNA4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RNF111Q6ZNA4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF111Q6ZNA4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
RNF111Q6ZNA4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 PCDHB18P-201ENST00000524813 2368 ntBASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 DUSP5P2-201ENST00000426873 1033 ntBASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 AC069152.1-201ENST00000438030 544 ntBASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF111Q6ZNA4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms