Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NHLRC1Q6VVB1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 POM121L13P-201ENST00000422362 380 ntBASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NHLRC1Q6VVB1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NHLRC1Q6VVB1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NHLRC1Q6VVB1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms