Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 AL136038.3-201ENST00000561909 1096 ntBASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 AL353719.1-201ENST00000566847 864 ntBASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.17■□□□□ 0.02
SHISA2Q6UWI4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 TFP1-202ENST00000475455 1573 ntBASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 ECEL1P1-201ENST00000373592 1742 ntBASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 GUSBP5-202ENST00000510805 1989 ntBASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHISA2Q6UWI4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 PRSS44-201ENST00000515154 1146 ntBASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 AL023803.3-201ENST00000615559 522 ntBASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 KRT16P6-202ENST00000425692 1426 ntBASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHISA2Q6UWI4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.02
SHISA2Q6UWI4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 AC008040.2-201ENST00000461049 708 ntBASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 CA15P1-201ENST00000481698 905 ntBASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 AL023973.1-201ENST00000624619 620 ntBASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 AC242852.2-201ENST00000615738 1807 ntBASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA2Q6UWI4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA2Q6UWI4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA2Q6UWI4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA2Q6UWI4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms