Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RFWD3Q6PCD5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 HTR7P1-201ENST00000538670 1336 ntBASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 AC012618.2-201ENST00000428058 849 ntBASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 SNORA78-201ENST00000459373 127 ntBASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 AC233702.5-201ENST00000584107 538 ntBASIC20.33■□□□□ 0.85
RFWD3Q6PCD5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RFWD3Q6PCD5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RFWD3Q6PCD5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 AL049637.2-201ENST00000641778 930 ntBASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RFWD3Q6PCD5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 AC113410.3-201ENST00000623366 203 ntBASIC20.3■□□□□ 0.84
RFWD3Q6PCD5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms