Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC133681.1-201ENST00000465482 601 ntBASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 AL359736.2-201ENST00000621992 437 ntBASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HLA-DQA1Q5Y7H0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 TUBB8P6-201ENST00000436895 1288 ntBASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.19■□□□□ 0.5
HLA-DQA1Q5Y7H0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 GCSHP5-201ENST00000443090 522 ntBASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 AC073130.3-201ENST00000624389 2278 ntBASIC18.18■□□□□ 0.5
HLA-DQA1Q5Y7H0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DQA1Q5Y7H0 KRT16P5-201ENST00000455284 522 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms