Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.42■■□□□ 1.18
USH1GQ495M9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
USH1GQ495M9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.42■■□□□ 1.18
USH1GQ495M9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 AC011506.1-201ENST00000474329 610 ntBASIC22.42■■□□□ 1.18
USH1GQ495M9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.42■■□□□ 1.18
USH1GQ495M9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.42■■□□□ 1.18
USH1GQ495M9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
USH1GQ495M9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
USH1GQ495M9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.42■■□□□ 1.18
USH1GQ495M9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.42■■□□□ 1.18
USH1GQ495M9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
USH1GQ495M9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.41■■□□□ 1.18
USH1GQ495M9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.41■■□□□ 1.18
USH1GQ495M9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 B3GAT3P1-201ENST00000471720 806 ntBASIC22.41■■□□□ 1.18
USH1GQ495M9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.41■■□□□ 1.18
USH1GQ495M9 AC026271.3-201ENST00000571884 352 ntBASIC22.41■■□□□ 1.18
USH1GQ495M9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.41■■□□□ 1.18
USH1GQ495M9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
USH1GQ495M9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
USH1GQ495M9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
USH1GQ495M9 FSCN1P1-201ENST00000568912 1481 ntBASIC22.41■■□□□ 1.18
USH1GQ495M9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.4■■□□□ 1.18
USH1GQ495M9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.4■■□□□ 1.18
USH1GQ495M9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
USH1GQ495M9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.4■■□□□ 1.18
USH1GQ495M9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 LINC01521-201ENST00000504184 1943 ntBASIC22.4■■□□□ 1.18
USH1GQ495M9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
USH1GQ495M9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.4■■□□□ 1.18
USH1GQ495M9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.4■■□□□ 1.18
USH1GQ495M9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
USH1GQ495M9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.4■■□□□ 1.18
USH1GQ495M9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
USH1GQ495M9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.4■■□□□ 1.18
USH1GQ495M9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
USH1GQ495M9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
USH1GQ495M9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.39■■□□□ 1.18
USH1GQ495M9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.39■■□□□ 1.18
USH1GQ495M9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
USH1GQ495M9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.39■■□□□ 1.18
USH1GQ495M9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.39■■□□□ 1.18
USH1GQ495M9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
USH1GQ495M9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.18
USH1GQ495M9 LBX2-AS1-202ENST00000603175 2083 ntBASIC22.39■■□□□ 1.17
USH1GQ495M9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
USH1GQ495M9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.39■■□□□ 1.17
USH1GQ495M9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.17
USH1GQ495M9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.39■■□□□ 1.17
USH1GQ495M9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.39■■□□□ 1.17
USH1GQ495M9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
USH1GQ495M9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.39■■□□□ 1.17
USH1GQ495M9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
USH1GQ495M9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
USH1GQ495M9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
USH1GQ495M9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
USH1GQ495M9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.38■■□□□ 1.17
USH1GQ495M9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.38■■□□□ 1.17
USH1GQ495M9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
USH1GQ495M9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.38■■□□□ 1.17
USH1GQ495M9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.38■■□□□ 1.17
USH1GQ495M9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
USH1GQ495M9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms