Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC139887.4-201ENST00000607877 719 ntBASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 AL391422.3-201ENST00000603791 2761 ntBASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTC1Q2NKJ3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
CTC1Q2NKJ3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTC1Q2NKJ3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 TSPY5P-201ENST00000426936 936 ntBASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 YBX1P2-201ENST00000489612 999 ntBASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 KRT8P20-201ENST00000423953 1409 ntBASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTC1Q2NKJ3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 DUSP5P1-201ENST00000441325 1139 ntBASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 AC130371.2-201ENST00000619443 611 ntBASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CTC1Q2NKJ3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 AP000692.2-201ENST00000608391 879 ntBASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.83■□□□□ 0.93
CTC1Q2NKJ3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms