Protein–RNA interactions for Protein: Q15477

SKIV2L, Helicase SKI2W, humanhuman

Known RBP Predictions only

Length 1,246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2LQ15477 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 KRT8P10-201ENST00000450021 1447 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 ATP5G2P1-201ENST00000433580 426 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 AC112907.2-201ENST00000448639 330 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 AC111152.3-201ENST00000569699 673 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 AC092119.3-201ENST00000612618 583 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 CR769767.2-201ENST00000622735 460 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 MIR2861-201ENST00000636310 90 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
SKIV2LQ15477 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SKIV2LQ15477 AC096733.2-201ENST00000609937 1394 ntBASIC20.72■□□□□ 0.91
SKIV2LQ15477 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 AC008622.2-201ENST00000617006 1229 ntBASIC20.71■□□□□ 0.91
SKIV2LQ15477 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SKIV2LQ15477 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.71■□□□□ 0.91
SKIV2LQ15477 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SKIV2LQ15477 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 KRT8P45-201ENST00000414328 1447 ntBASIC20.7■□□□□ 0.9
SKIV2LQ15477 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 ZNF444P1-201ENST00000559497 298 ntBASIC20.7■□□□□ 0.9
SKIV2LQ15477 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.7■□□□□ 0.9
SKIV2LQ15477 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SKIV2LQ15477 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 CKBP1-201ENST00000565489 1086 ntBASIC20.69■□□□□ 0.9
SKIV2LQ15477 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SKIV2LQ15477 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SKIV2LQ15477 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKIV2LQ15477 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SKIV2LQ15477 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.68■□□□□ 0.9
SKIV2LQ15477 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SKIV2LQ15477 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKIV2LQ15477 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SKIV2LQ15477 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SKIV2LQ15477 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.68■□□□□ 0.9
SKIV2LQ15477 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms