Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CDH17Q12864 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH17Q12864 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CDH17Q12864 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH17Q12864 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 ID1-201ENST00000376105 1233 ntBASIC19.7■□□□□ 0.74
CDH17Q12864 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.7■□□□□ 0.74
CDH17Q12864 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH17Q12864 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH17Q12864 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CDH17Q12864 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH17Q12864 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
CDH17Q12864 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH17Q12864 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH17Q12864 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
CDH17Q12864 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH17Q12864 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDH17Q12864 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CDH17Q12864 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH17Q12864 UNC93B5-201ENST00000530315 699 ntBASIC19.69■□□□□ 0.74
CDH17Q12864 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.69■□□□□ 0.74
CDH17Q12864 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH17Q12864 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH17Q12864 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CDH17Q12864 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CDH17Q12864 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CDH17Q12864 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CDH17Q12864 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CDH17Q12864 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH17Q12864 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH17Q12864 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH17Q12864 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH17Q12864 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH17Q12864 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH17Q12864 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH17Q12864 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH17Q12864 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH17Q12864 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CDH17Q12864 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH17Q12864 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 ZNF815P-204ENST00000434898 1737 ntBASIC19.67■□□□□ 0.74
CDH17Q12864 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.67■□□□□ 0.74
CDH17Q12864 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
CDH17Q12864 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH17Q12864 KRT8P8-201ENST00000434750 1448 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms