Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC104771.1-201ENST00000603335 964 ntBASIC18.79■□□□□ 0.6
HMGCS1Q01581 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGCS1Q01581 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGCS1Q01581 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 RPS2P52-201ENST00000469610 820 ntBASIC18.78■□□□□ 0.6
HMGCS1Q01581 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 MYC-209ENST00000641252 345 ntBASIC18.78■□□□□ 0.6
HMGCS1Q01581 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGCS1Q01581 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGCS1Q01581 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 AL138781.1-201ENST00000566567 1274 ntBASIC18.77■□□□□ 0.6
HMGCS1Q01581 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HMGCS1Q01581 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
HMGCS1Q01581 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCS1Q01581 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.77■□□□□ 0.59
HMGCS1Q01581 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCS1Q01581 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HMGCS1Q01581 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HMGCS1Q01581 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 AC092368.3-202ENST00000574180 1591 ntBASIC18.76■□□□□ 0.59
HMGCS1Q01581 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 AC097658.1-201ENST00000475555 843 ntBASIC18.76■□□□□ 0.59
HMGCS1Q01581 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HMGCS1Q01581 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HMGCS1Q01581 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.75■□□□□ 0.59
HMGCS1Q01581 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HMGCS1Q01581 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
HMGCS1Q01581 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS1Q01581 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms