Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RPL39P62891 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL39P62891 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL39P62891 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.78□□□□□ -0.2
RPL39P62891 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 AC019069.1-201ENST00000610008 1333 ntBASIC13.78□□□□□ -0.2
RPL39P62891 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RPL39P62891 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RPL39P62891 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 AC006333.2-201ENST00000607957 2099 ntBASIC13.78□□□□□ -0.2
RPL39P62891 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL39P62891 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL39P62891 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RPL39P62891 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RPL39P62891 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
RPL39P62891 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RPL39P62891 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RPL39P62891 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.77□□□□□ -0.21
RPL39P62891 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RPL39P62891 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RPL39P62891 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.77□□□□□ -0.21
RPL39P62891 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 TESC-206ENST00000541210 936 ntTSL 3 BASIC13.77□□□□□ -0.21
RPL39P62891 AL031963.3-201ENST00000606441 850 ntBASIC13.77□□□□□ -0.21
RPL39P62891 AL031432.3-201ENST00000607698 485 ntBASIC13.77□□□□□ -0.21
RPL39P62891 AC131212.1-201ENST00000613771 668 ntBASIC13.77□□□□□ -0.21
RPL39P62891 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RPL39P62891 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.77□□□□□ -0.21
RPL39P62891 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
RPL39P62891 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RPL39P62891 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
RPL39P62891 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms