Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.12■□□□□ 0.33
DEFA3P59666 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DEFA3P59666 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DEFA3P59666 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.12■□□□□ 0.33
DEFA3P59666 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.12■□□□□ 0.33
DEFA3P59666 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
DEFA3P59666 AL031598.1-201ENST00000561511 1773 ntBASIC17.12■□□□□ 0.33
DEFA3P59666 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.12■□□□□ 0.33
DEFA3P59666 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DEFA3P59666 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DEFA3P59666 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
DEFA3P59666 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DEFA3P59666 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA3P59666 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.11■□□□□ 0.33
DEFA3P59666 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DEFA3P59666 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 AC099398.1-201ENST00000567919 2776 ntBASIC17.11■□□□□ 0.33
DEFA3P59666 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.11■□□□□ 0.33
DEFA3P59666 AC074183.2-201ENST00000623112 922 ntBASIC17.11■□□□□ 0.33
DEFA3P59666 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DEFA3P59666 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA3P59666 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.11■□□□□ 0.33
DEFA3P59666 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
DEFA3P59666 AP004607.4-201ENST00000530158 1459 ntBASIC17.11■□□□□ 0.33
DEFA3P59666 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DEFA3P59666 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
DEFA3P59666 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DEFA3P59666 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DEFA3P59666 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DEFA3P59666 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DEFA3P59666 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
DEFA3P59666 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.1■□□□□ 0.33
DEFA3P59666 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DEFA3P59666 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.1■□□□□ 0.33
DEFA3P59666 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.1■□□□□ 0.33
DEFA3P59666 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DEFA3P59666 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DEFA3P59666 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DEFA3P59666 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DEFA3P59666 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.09■□□□□ 0.33
DEFA3P59666 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DEFA3P59666 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DEFA3P59666 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms