Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN20P56880 AL359736.2-201ENST00000621992 437 ntBASIC17.87■□□□□ 0.45
CLDN20P56880 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN20P56880 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN20P56880 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
CLDN20P56880 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN20P56880 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN20P56880 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN20P56880 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN20P56880 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN20P56880 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.86■□□□□ 0.45
CLDN20P56880 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 AL121829.2-201ENST00000620908 328 ntBASIC17.86■□□□□ 0.45
CLDN20P56880 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN20P56880 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN20P56880 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN20P56880 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLDN20P56880 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN20P56880 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN20P56880 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN20P56880 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN20P56880 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CLDN20P56880 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN20P56880 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN20P56880 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN20P56880 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN20P56880 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CLDN20P56880 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 AL121906.2-201ENST00000621597 723 ntBASIC17.85■□□□□ 0.45
CLDN20P56880 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN20P56880 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN20P56880 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CLDN20P56880 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CLDN20P56880 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.84■□□□□ 0.45
CLDN20P56880 AC239809.2-201ENST00000415381 517 ntBASIC17.84■□□□□ 0.45
CLDN20P56880 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CLDN20P56880 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CLDN20P56880 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLDN20P56880 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLDN20P56880 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.83■□□□□ 0.45
CLDN20P56880 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms