Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.68■□□□□ 0.42
SUMO3P55854 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.68■□□□□ 0.42
SUMO3P55854 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SUMO3P55854 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.68■□□□□ 0.42
SUMO3P55854 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.68■□□□□ 0.42
SUMO3P55854 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 ZNF815P-204ENST00000434898 1737 ntBASIC17.68■□□□□ 0.42
SUMO3P55854 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.68■□□□□ 0.42
SUMO3P55854 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 AL158211.5-201ENST00000623583 2518 ntBASIC17.68■□□□□ 0.42
SUMO3P55854 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
SUMO3P55854 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.67■□□□□ 0.42
SUMO3P55854 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SUMO3P55854 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SUMO3P55854 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SUMO3P55854 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SUMO3P55854 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 GCSHP5-201ENST00000443090 522 ntBASIC17.67■□□□□ 0.42
SUMO3P55854 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.67■□□□□ 0.42
SUMO3P55854 AC142381.4-202ENST00000563973 229 ntBASIC17.67■□□□□ 0.42
SUMO3P55854 RARRES2P10-201ENST00000564312 460 ntBASIC17.67■□□□□ 0.42
SUMO3P55854 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.67■□□□□ 0.42
SUMO3P55854 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SUMO3P55854 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.67■□□□□ 0.42
SUMO3P55854 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.67■□□□□ 0.42
SUMO3P55854 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.67■□□□□ 0.42
SUMO3P55854 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SUMO3P55854 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.67■□□□□ 0.42
SUMO3P55854 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
SUMO3P55854 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.67■□□□□ 0.42
SUMO3P55854 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SUMO3P55854 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SUMO3P55854 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SUMO3P55854 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SUMO3P55854 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.66■□□□□ 0.42
SUMO3P55854 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
SUMO3P55854 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.66■□□□□ 0.42
SUMO3P55854 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SUMO3P55854 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 AC098590.1-201ENST00000468126 897 ntBASIC17.66■□□□□ 0.42
SUMO3P55854 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.66■□□□□ 0.42
SUMO3P55854 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.66■□□□□ 0.42
SUMO3P55854 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 AL353708.3-201ENST00000610272 989 ntBASIC17.66■□□□□ 0.42
SUMO3P55854 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SUMO3P55854 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SUMO3P55854 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.66■□□□□ 0.42
SUMO3P55854 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
SUMO3P55854 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.65■□□□□ 0.42
SUMO3P55854 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.65■□□□□ 0.42
SUMO3P55854 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SUMO3P55854 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.65■□□□□ 0.42
SUMO3P55854 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SUMO3P55854 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SUMO3P55854 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.65■□□□□ 0.42
SUMO3P55854 UBE2SP1-201ENST00000450587 669 ntBASIC17.65■□□□□ 0.42
SUMO3P55854 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.65■□□□□ 0.42
SUMO3P55854 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.65■□□□□ 0.42
SUMO3P55854 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.65■□□□□ 0.42
SUMO3P55854 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
SUMO3P55854 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms