Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC083906.2-201ENST00000511578 360 ntBASIC19.06■□□□□ 0.64
CDH13P55290 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.06■□□□□ 0.64
CDH13P55290 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDH13P55290 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDH13P55290 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH13P55290 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH13P55290 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH13P55290 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH13P55290 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 AC093503.3-201ENST00000624917 2352 ntBASIC19.05■□□□□ 0.64
CDH13P55290 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 AC124283.5-201ENST00000624661 1809 ntBASIC19.05■□□□□ 0.64
CDH13P55290 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 AL390719.1-204ENST00000412397 1219 ntBASIC19.05■□□□□ 0.64
CDH13P55290 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH13P55290 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDH13P55290 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 AC006557.6-201ENST00000623071 864 ntBASIC19.05■□□□□ 0.64
CDH13P55290 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH13P55290 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.05■□□□□ 0.64
CDH13P55290 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH13P55290 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CDH13P55290 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH13P55290 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.04■□□□□ 0.64
CDH13P55290 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH13P55290 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH13P55290 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 AC005829.2-201ENST00000571422 1056 ntBASIC19.04■□□□□ 0.64
CDH13P55290 AL121832.2-201ENST00000610979 668 ntBASIC19.04■□□□□ 0.64
CDH13P55290 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CDH13P55290 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDH13P55290 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH13P55290 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDH13P55290 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.03■□□□□ 0.64
CDH13P55290 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH13P55290 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.03■□□□□ 0.64
CDH13P55290 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 AC006970.2-201ENST00000450065 779 ntBASIC19.03■□□□□ 0.64
CDH13P55290 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.03■□□□□ 0.64
CDH13P55290 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 LINC01465-201ENST00000408887 1940 ntBASIC19.03■□□□□ 0.64
CDH13P55290 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CDH13P55290 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH13P55290 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CDH13P55290 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms