Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 NIFKP9-201ENST00000419265 221 ntBASIC20.67■□□□□ 0.9
CACNA2D1P54289 TUBB8P6-201ENST00000436895 1288 ntBASIC20.67■□□□□ 0.9
CACNA2D1P54289 AP002982.1-201ENST00000492365 877 ntBASIC20.67■□□□□ 0.9
CACNA2D1P54289 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 AC073195.1-201ENST00000607241 877 ntBASIC20.67■□□□□ 0.9
CACNA2D1P54289 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.67■□□□□ 0.9
CACNA2D1P54289 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CACNA2D1P54289 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.66■□□□□ 0.9
CACNA2D1P54289 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNA2D1P54289 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CACNA2D1P54289 AL353807.1-201ENST00000427475 662 ntBASIC20.66■□□□□ 0.9
CACNA2D1P54289 AP001412.1-201ENST00000608405 714 ntBASIC20.66■□□□□ 0.9
CACNA2D1P54289 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
CACNA2D1P54289 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CACNA2D1P54289 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CACNA2D1P54289 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CACNA2D1P54289 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CACNA2D1P54289 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D1P54289 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CACNA2D1P54289 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D1P54289 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D1P54289 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CACNA2D1P54289 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 AL355075.4-201ENST00000554988 638 ntBASIC20.64■□□□□ 0.89
CACNA2D1P54289 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 AC026471.5-201ENST00000615068 467 ntBASIC20.64■□□□□ 0.89
CACNA2D1P54289 CR392000.1-201ENST00000624770 1228 ntBASIC20.64■□□□□ 0.89
CACNA2D1P54289 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CACNA2D1P54289 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.63■□□□□ 0.89
CACNA2D1P54289 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CACNA2D1P54289 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms