Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CLTCL1P53675 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC28.02■■■□□ 2.08
CLTCL1P53675 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CLTCL1P53675 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CLTCL1P53675 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CLTCL1P53675 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
CLTCL1P53675 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 TSPY17P-201ENST00000450329 467 ntBASIC28.01■■■□□ 2.07
CLTCL1P53675 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC28.01■■■□□ 2.07
CLTCL1P53675 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC28.01■■■□□ 2.07
CLTCL1P53675 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.07
CLTCL1P53675 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CLTCL1P53675 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CLTCL1P53675 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CLTCL1P53675 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CLTCL1P53675 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CLTCL1P53675 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC28■■■□□ 2.07
CLTCL1P53675 SAPCD2P2-201ENST00000431719 1174 ntBASIC28■■■□□ 2.07
CLTCL1P53675 AL359075.1-203ENST00000462729 1002 ntBASIC28■■■□□ 2.07
CLTCL1P53675 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 AL353719.1-201ENST00000566847 864 ntBASIC28■■■□□ 2.07
CLTCL1P53675 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC28■■■□□ 2.07
CLTCL1P53675 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
CLTCL1P53675 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CLTCL1P53675 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC28■■■□□ 2.07
CLTCL1P53675 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC28■■■□□ 2.07
CLTCL1P53675 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC28■■■□□ 2.07
CLTCL1P53675 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28■■■□□ 2.07
CLTCL1P53675 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC28■■■□□ 2.07
CLTCL1P53675 GPX4-207ENST00000589115 812 ntTSL 2 BASIC28■■■□□ 2.07
CLTCL1P53675 AL358472.4-201ENST00000633140 710 ntBASIC28■■■□□ 2.07
CLTCL1P53675 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
CLTCL1P53675 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CLTCL1P53675 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CLTCL1P53675 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CLTCL1P53675 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
CLTCL1P53675 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
CLTCL1P53675 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC27.99■■■□□ 2.07
CLTCL1P53675 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC27.99■■■□□ 2.07
CLTCL1P53675 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC27.99■■■□□ 2.07
CLTCL1P53675 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC27.99■■■□□ 2.07
CLTCL1P53675 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC27.99■■■□□ 2.07
CLTCL1P53675 AC083849.1-201ENST00000615227 514 ntBASIC27.99■■■□□ 2.07
CLTCL1P53675 AC008622.2-201ENST00000617006 1229 ntBASIC27.99■■■□□ 2.07
CLTCL1P53675 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CLTCL1P53675 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC27.99■■■□□ 2.07
CLTCL1P53675 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
CLTCL1P53675 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
CLTCL1P53675 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CLTCL1P53675 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CLTCL1P53675 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CLTCL1P53675 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CLTCL1P53675 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC27.98■■■□□ 2.07
CLTCL1P53675 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC27.98■■■□□ 2.07
CLTCL1P53675 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC27.98■■■□□ 2.07
CLTCL1P53675 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC27.98■■■□□ 2.07
CLTCL1P53675 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CLTCL1P53675 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CLTCL1P53675 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CLTCL1P53675 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC27.98■■■□□ 2.07
CLTCL1P53675 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC27.97■■■□□ 2.07
CLTCL1P53675 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC27.97■■■□□ 2.07
CLTCL1P53675 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC27.97■■■□□ 2.07
CLTCL1P53675 AL023973.1-201ENST00000624619 620 ntBASIC27.97■■■□□ 2.07
CLTCL1P53675 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
CLTCL1P53675 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
CLTCL1P53675 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CLTCL1P53675 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
CLTCL1P53675 BX664615.1-201ENST00000443558 458 ntBASIC27.96■■■□□ 2.07
CLTCL1P53675 COX11P1-201ENST00000489116 835 ntBASIC27.96■■■□□ 2.07
CLTCL1P53675 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC27.96■■■□□ 2.07
CLTCL1P53675 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC27.96■■■□□ 2.07
CLTCL1P53675 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
CLTCL1P53675 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
CLTCL1P53675 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
CLTCL1P53675 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC27.96■■■□□ 2.07
CLTCL1P53675 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CLTCL1P53675 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CLTCL1P53675 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms