Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC007322.1-201ENST00000426983 750 ntBASIC18.65■□□□□ 0.58
POLR2JP52435 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
POLR2JP52435 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.65■□□□□ 0.58
POLR2JP52435 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.65■□□□□ 0.58
POLR2JP52435 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR2JP52435 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR2JP52435 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR2JP52435 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
POLR2JP52435 CROCCP3-202ENST00000420820 1947 ntBASIC18.64■□□□□ 0.58
POLR2JP52435 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR2JP52435 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
POLR2JP52435 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR2JP52435 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.64■□□□□ 0.58
POLR2JP52435 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR2JP52435 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
POLR2JP52435 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
POLR2JP52435 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
POLR2JP52435 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
POLR2JP52435 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
POLR2JP52435 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
POLR2JP52435 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
POLR2JP52435 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
POLR2JP52435 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 BID-214ENST00000617586 542 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR2JP52435 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
POLR2JP52435 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR2JP52435 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR2JP52435 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR2JP52435 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
POLR2JP52435 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR2JP52435 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR2JP52435 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR2JP52435 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR2JP52435 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR2JP52435 AC141586.3-201ENST00000562166 1838 ntBASIC18.62■□□□□ 0.57
POLR2JP52435 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.62■□□□□ 0.57
POLR2JP52435 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR2JP52435 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.61■□□□□ 0.57
POLR2JP52435 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
POLR2JP52435 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR2JP52435 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR2JP52435 AL049812.1-201ENST00000432563 2267 ntBASIC18.61■□□□□ 0.57
POLR2JP52435 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms