Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.193e-10■■□□□ 14.2
NCBP2P52298 SEPT9-227ENST00000590059 670 ntTSL 519.57■□□□□ 0.722e-6■■□□□ 14.2
NCBP2P52298 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.142e-6■■□□□ 14.2
NCBP2P52298 DDI2-205ENST00000546927 592 ntTSL 218.04■□□□□ 0.481e-10■■□□□ 14.2
NCBP2P52298 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-10■■□□□ 14.2
NCBP2P52298 ATG9A-215ENST00000446716 5245 ntTSL 217.48■□□□□ 0.391e-31■■□□□ 14.2
NCBP2P52298 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -01e-31■■□□□ 14.2
NCBP2P52298 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.364e-10■■□□□ 14.2
NCBP2P52298 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.74□□□□□ -0.374e-10■■□□□ 14.2
NCBP2P52298 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.384e-10■■□□□ 14.2
NCBP2P52298 PPP4R3B-204ENST00000612688 2981 ntTSL 210.9□□□□□ -0.664e-10■■□□□ 14.2
NCBP2P52298 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.723e-9■■□□□ 14.2
NCBP2P52298 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.37■□□□□ 0.693e-10■■□□□ 14.2
NCBP2P52298 NFYC-209ENST00000424419 1276 ntTSL 219.34■□□□□ 0.693e-10■■□□□ 14.2
NCBP2P52298 NFYC-214ENST00000453631 650 ntTSL 519.06■□□□□ 0.643e-10■■□□□ 14.2
NCBP2P52298 NFYC-224ENST00000534399 574 ntTSL 417.16■□□□□ 0.343e-10■■□□□ 14.2
NCBP2P52298 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.27■□□□□ 0.043e-10■■□□□ 14.2
NCBP2P52298 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.13e-10■■□□□ 14.2
NCBP2P52298 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-10■■□□□ 14.2
NCBP2P52298 NFYC-206ENST00000372669 1005 ntTSL 511.79□□□□□ -0.523e-10■■□□□ 14.2
NCBP2P52298 NFYC-216ENST00000467203 943 ntTSL 211.68□□□□□ -0.543e-10■■□□□ 14.2
NCBP2P52298 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC9.24□□□□□ -0.933e-10■■□□□ 14.2
NCBP2P52298 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC9.01□□□□□ -0.973e-10■■□□□ 14.2
NCBP2P52298 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.023e-10■■□□□ 14.2
NCBP2P52298 CEP192-204ENST00000507064 706 ntTSL 310.74□□□□□ -0.693e-7■■□□□ 14.2
NCBP2P52298 CEP192-214ENST00000589596 3793 ntAPPRIS ALT2 TSL 26.14□□□□□ -1.433e-7■■□□□ 14.2
NCBP2P52298 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.683e-7■■□□□ 14.2
NCBP2P52298 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.26□□□□□ -1.733e-7■■□□□ 14.2
NCBP2P52298 NKD1-202ENST00000564336 477 ntTSL 320.55■□□□□ 0.882e-7■■□□□ 14.2
NCBP2P52298 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.21■□□□□ 0.513e-6■■□□□ 14.2
NCBP2P52298 GIPR-203ENST00000585889 1414 ntTSL 1 (best)17.87■□□□□ 0.453e-6■■□□□ 14.2
NCBP2P52298 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.253e-6■■□□□ 14.2
NCBP2P52298 GIPR-207ENST00000591322 557 ntTSL 415.13■□□□□ 0.013e-6■■□□□ 14.2
NCBP2P52298 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.383e-6■■□□□ 14.2
NCBP2P52298 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.633e-7■■□□□ 14.1
NCBP2P52298 HELLS-207ENST00000419900 711 ntTSL 315□□□□□ -0.012e-7■■□□□ 14.1
NCBP2P52298 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.252e-7■■□□□ 14.1
NCBP2P52298 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.66□□□□□ -0.382e-7■■□□□ 14.1
NCBP2P52298 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.71□□□□□ -1.822e-7■■□□□ 14.1
NCBP2P52298 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.03□□□□□ -2.092e-7■■□□□ 14.1
NCBP2P52298 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.17□□□□□ -0.142e-6■■□□□ 14.1
NCBP2P52298 TSGA10-217ENST00000494483 559 ntTSL 219.81■□□□□ 0.762e-7■■□□□ 14.1
NCBP2P52298 TSGA10-206ENST00000462782 561 ntTSL 218.13■□□□□ 0.492e-7■■□□□ 14.1
NCBP2P52298 TSGA10-218ENST00000497915 580 ntTSL 417.81■□□□□ 0.442e-7■■□□□ 14.1
NCBP2P52298 TSGA10-216ENST00000489926 588 ntTSL 417.55■□□□□ 0.42e-7■■□□□ 14.1
NCBP2P52298 TSGA10-209ENST00000471174 595 ntTSL 414.01□□□□□ -0.172e-7■■□□□ 14.1
NCBP2P52298 TSGA10-210ENST00000476849 736 ntTSL 512.82□□□□□ -0.362e-7■■□□□ 14.1
NCBP2P52298 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.442e-7■■□□□ 14.1
NCBP2P52298 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.92e-7■■□□□ 14.1
NCBP2P52298 TSGA10-202ENST00000393482 2460 ntAPPRIS ALT2 TSL 58.72□□□□□ -1.012e-7■■□□□ 14.1
NCBP2P52298 TSGA10-207ENST00000464459 2492 ntTSL 28.06□□□□□ -1.122e-7■■□□□ 14.1
NCBP2P52298 ANAPC16-203ENST00000478193 734 ntTSL 212.09□□□□□ -0.471e-13■■□□□ 14.1
NCBP2P52298 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.691e-13■■□□□ 14.1
NCBP2P52298 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.791e-13■■□□□ 14.1
NCBP2P52298 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC8.86□□□□□ -0.991e-13■■□□□ 14.1
NCBP2P52298 ASPSCR1-205ENST00000578236 3277 ntTSL 212.53□□□□□ -0.43e-7■■□□□ 14.1
NCBP2P52298 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.679e-7■■□□□ 14.1
NCBP2P52298 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.36■□□□□ 0.539e-7■■□□□ 14.1
NCBP2P52298 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.65■□□□□ 0.19e-7■■□□□ 14.1
NCBP2P52298 FADS3-211ENST00000533676 5314 ntTSL 214.47□□□□□ -0.099e-7■■□□□ 14.1
NCBP2P52298 FADS3-208ENST00000529404 2379 ntTSL 214.31□□□□□ -0.129e-7■■□□□ 14.1
NCBP2P52298 FADS3-210ENST00000531956 841 ntTSL 514.06□□□□□ -0.169e-7■■□□□ 14.1
NCBP2P52298 FADS3-206ENST00000527379 768 ntTSL 313.9□□□□□ -0.189e-7■■□□□ 14.1
NCBP2P52298 FADS3-212ENST00000534223 800 ntTSL 511.54□□□□□ -0.569e-7■■□□□ 14.1
NCBP2P52298 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.39□□□□□ -0.272e-6■■□□□ 14.1
NCBP2P52298 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.74■■□□□ 1.234e-13■■□□□ 14.1
NCBP2P52298 PDPK1-215ENST00000566659 451 ntTSL 318.56■□□□□ 0.564e-13■■□□□ 14.1
NCBP2P52298 PDPK1-207ENST00000462923 550 ntTSL 518.56■□□□□ 0.564e-13■■□□□ 14.1
NCBP2P52298 PDPK1-213ENST00000492021 552 ntTSL 517.99■□□□□ 0.474e-13■■□□□ 14.1
NCBP2P52298 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-13■■□□□ 14.1
NCBP2P52298 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.19□□□□□ -0.144e-13■■□□□ 14.1
NCBP2P52298 PDPK1-217ENST00000570136 1125 ntTSL 213.89□□□□□ -0.194e-13■■□□□ 14.1
NCBP2P52298 PDPK1-210ENST00000474706 699 ntTSL 512.08□□□□□ -0.484e-13■■□□□ 14.1
NCBP2P52298 AGBL3-205ENST00000470839 574 ntTSL 416.71■□□□□ 0.275e-8■■□□□ 14.1
NCBP2P52298 AGBL3-204ENST00000455283 497 ntTSL 216.06■□□□□ 0.165e-8■■□□□ 14.1
NCBP2P52298 AGBL3-207ENST00000494702 856 ntTSL 315.49■□□□□ 0.075e-8■■□□□ 14.1
NCBP2P52298 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.56□□□□□ -0.45e-8■■□□□ 14.1
NCBP2P52298 AGBL3-206ENST00000476700 2979 ntTSL 29.83□□□□□ -0.845e-8■■□□□ 14.1
NCBP2P52298 AGBL3-201ENST00000275763 2973 ntTSL 1 (best)9.8□□□□□ -0.845e-8■■□□□ 14.1
NCBP2P52298 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.955e-8■■□□□ 14.1
NCBP2P52298 RAD9A-210ENST00000621995 912 ntTSL 324.11■■□□□ 1.456e-9■■□□□ 14.1
NCBP2P52298 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.976e-9■■□□□ 14.1
NCBP2P52298 RAD9A-205ENST00000538013 924 ntTSL 517.09■□□□□ 0.336e-9■■□□□ 14.1
NCBP2P52298 RAD9A-209ENST00000544620 829 ntTSL 316.92■□□□□ 0.36e-9■■□□□ 14.1
NCBP2P52298 RAD9A-206ENST00000541132 586 ntTSL 316.05■□□□□ 0.166e-9■■□□□ 14.1
NCBP2P52298 RAD9A-208ENST00000543808 822 ntTSL 514.51□□□□□ -0.096e-9■■□□□ 14.1
NCBP2P52298 RAD9A-207ENST00000542139 578 ntTSL 413.36□□□□□ -0.276e-9■■□□□ 14.1
NCBP2P52298 DYRK1A-209ENST00000608928 483 ntTSL 519.66■□□□□ 0.744e-11■■□□□ 14.1
NCBP2P52298 MVD-212ENST00000565842 285 ntTSL 322.01■■□□□ 1.112e-7■■□□□ 14.1
NCBP2P52298 MVD-216ENST00000568709 809 ntTSL 517.22■□□□□ 0.352e-7■■□□□ 14.1
NCBP2P52298 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.432e-7■■□□□ 14
NCBP2P52298 OAZ1-210ENST00000593012 1357 ntTSL 217.32■□□□□ 0.362e-7■■□□□ 14
NCBP2P52298 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.112e-7■■□□□ 14
NCBP2P52298 OAZ1-201ENST00000581150 1131 ntTSL 515.69■□□□□ 0.12e-7■■□□□ 14
NCBP2P52298 OAZ1-209ENST00000592787 857 ntTSL 215.03■□□□□ -02e-7■■□□□ 14
NCBP2P52298 OAZ1-207ENST00000590943 1012 ntTSL 214.94□□□□□ -0.022e-7■■□□□ 14
NCBP2P52298 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.334e-10■■□□□ 14
NCBP2P52298 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.81■□□□□ 0.286e-54■■□□□ 14
NCBP2P52298 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.94□□□□□ -0.186e-54■■□□□ 14
NCBP2P52298 MALAT1-202ENST00000534336 8708 ntBASIC8.99□□□□□ -0.976e-54■■□□□ 14
Retrieved 100 of 18,329 protein–RNA pairs in 138.6 ms