Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 AC092368.3-202ENST00000574180 1591 ntBASIC20.42■□□□□ 0.86
SLC1A1P43005 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A1P43005 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A1P43005 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A1P43005 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A1P43005 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A1P43005 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC1A1P43005 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A1P43005 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC1A1P43005 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A1P43005 AL121906.2-201ENST00000621597 723 ntBASIC20.41■□□□□ 0.86
SLC1A1P43005 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC1A1P43005 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A1P43005 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A1P43005 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A1P43005 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SLC1A1P43005 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A1P43005 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.4■□□□□ 0.86
SLC1A1P43005 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.4■□□□□ 0.86
SLC1A1P43005 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A1P43005 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SLC1A1P43005 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A1P43005 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.4■□□□□ 0.86
SLC1A1P43005 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A1P43005 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
SLC1A1P43005 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
SLC1A1P43005 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 AC141586.3-201ENST00000562166 1838 ntBASIC20.39■□□□□ 0.86
SLC1A1P43005 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A1P43005 AP006587.1-201ENST00000534129 1502 ntBASIC20.39■□□□□ 0.85
SLC1A1P43005 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
SLC1A1P43005 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A1P43005 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A1P43005 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.39■□□□□ 0.85
SLC1A1P43005 YBX1P10-201ENST00000444752 975 ntBASIC20.39■□□□□ 0.85
SLC1A1P43005 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.39■□□□□ 0.85
SLC1A1P43005 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC1A1P43005 AC060766.5-201ENST00000590539 871 ntBASIC20.39■□□□□ 0.85
SLC1A1P43005 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC1A1P43005 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC1A1P43005 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
SLC1A1P43005 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A1P43005 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A1P43005 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC1A1P43005 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SLC1A1P43005 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A1P43005 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC1A1P43005 PNMA6B-201ENST00000538162 1200 ntBASIC20.38■□□□□ 0.85
SLC1A1P43005 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC1A1P43005 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A1P43005 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC1A1P43005 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A1P43005 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms