Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 AC079598.2-202ENST00000546624 1451 ntBASIC17.85■□□□□ 0.45
RFC3P40938 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.85■□□□□ 0.45
RFC3P40938 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RFC3P40938 AP005212.1-201ENST00000581547 1997 ntBASIC17.84■□□□□ 0.45
RFC3P40938 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
RFC3P40938 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.84■□□□□ 0.45
RFC3P40938 KRT8P9-201ENST00000558927 1449 ntBASIC17.84■□□□□ 0.45
RFC3P40938 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 MMP23A-201ENST00000234610 1017 ntBASIC17.84■□□□□ 0.45
RFC3P40938 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 MIR1238-201ENST00000408483 83 ntBASIC17.84■□□□□ 0.45
RFC3P40938 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
RFC3P40938 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.84■□□□□ 0.45
RFC3P40938 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.84■□□□□ 0.45
RFC3P40938 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
RFC3P40938 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.84■□□□□ 0.45
RFC3P40938 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 FEM1AP1-201ENST00000431297 1995 ntBASIC17.84■□□□□ 0.45
RFC3P40938 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.84■□□□□ 0.45
RFC3P40938 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RFC3P40938 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.83■□□□□ 0.45
RFC3P40938 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.83■□□□□ 0.45
RFC3P40938 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RFC3P40938 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.83■□□□□ 0.45
RFC3P40938 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.83■□□□□ 0.45
RFC3P40938 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RFC3P40938 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RFC3P40938 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC3P40938 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.83■□□□□ 0.44
RFC3P40938 KRT18P16-201ENST00000510337 1294 ntBASIC17.83■□□□□ 0.44
RFC3P40938 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.83■□□□□ 0.44
RFC3P40938 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.83■□□□□ 0.44
RFC3P40938 AL157384.1-201ENST00000445995 2473 ntBASIC17.83■□□□□ 0.44
RFC3P40938 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.83■□□□□ 0.44
RFC3P40938 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RFC3P40938 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RFC3P40938 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
RFC3P40938 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RFC3P40938 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC3P40938 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 UNC93B2-201ENST00000285383 730 ntBASIC17.82■□□□□ 0.44
RFC3P40938 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.82■□□□□ 0.44
RFC3P40938 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RFC3P40938 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.82■□□□□ 0.44
RFC3P40938 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RFC3P40938 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RFC3P40938 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
RFC3P40938 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RFC3P40938 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC3P40938 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.81■□□□□ 0.44
RFC3P40938 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFC3P40938 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC3P40938 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.81■□□□□ 0.44
RFC3P40938 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.81■□□□□ 0.44
RFC3P40938 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC3P40938 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.81■□□□□ 0.44
RFC3P40938 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.81■□□□□ 0.44
RFC3P40938 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms