Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCNN1AP37088 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SCNN1AP37088 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.34■□□□□ 0.85
SCNN1AP37088 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.33■□□□□ 0.85
SCNN1AP37088 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SCNN1AP37088 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SCNN1AP37088 AL353807.1-201ENST00000427475 662 ntBASIC20.33■□□□□ 0.85
SCNN1AP37088 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.33■□□□□ 0.85
SCNN1AP37088 AC093484.2-201ENST00000580996 2166 ntBASIC20.33■□□□□ 0.85
SCNN1AP37088 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCNN1AP37088 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCNN1AP37088 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCNN1AP37088 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.33■□□□□ 0.84
SCNN1AP37088 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.33■□□□□ 0.84
SCNN1AP37088 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.32■□□□□ 0.84
SCNN1AP37088 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.32■□□□□ 0.84
SCNN1AP37088 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.32■□□□□ 0.84
SCNN1AP37088 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.32■□□□□ 0.84
SCNN1AP37088 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.32■□□□□ 0.84
SCNN1AP37088 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.32■□□□□ 0.84
SCNN1AP37088 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.32■□□□□ 0.84
SCNN1AP37088 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.32■□□□□ 0.84
SCNN1AP37088 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.32■□□□□ 0.84
SCNN1AP37088 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.32■□□□□ 0.84
SCNN1AP37088 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SCNN1AP37088 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCNN1AP37088 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SCNN1AP37088 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.31■□□□□ 0.84
SCNN1AP37088 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.31■□□□□ 0.84
SCNN1AP37088 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 AC142381.4-202ENST00000563973 229 ntBASIC20.31■□□□□ 0.84
SCNN1AP37088 AL445675.2-201ENST00000620291 557 ntBASIC20.31■□□□□ 0.84
SCNN1AP37088 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.31■□□□□ 0.84
SCNN1AP37088 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.31■□□□□ 0.84
SCNN1AP37088 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCNN1AP37088 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.3■□□□□ 0.84
SCNN1AP37088 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCNN1AP37088 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.3■□□□□ 0.84
SCNN1AP37088 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 NIFKP9-201ENST00000419265 221 ntBASIC20.3■□□□□ 0.84
SCNN1AP37088 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SCNN1AP37088 FAM197Y4-202ENST00000622692 608 ntBASIC20.3■□□□□ 0.84
SCNN1AP37088 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCNN1AP37088 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SCNN1AP37088 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCNN1AP37088 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 HTR7P1-201ENST00000538670 1336 ntBASIC20.29■□□□□ 0.84
SCNN1AP37088 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.29■□□□□ 0.84
SCNN1AP37088 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SCNN1AP37088 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCNN1AP37088 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms