Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AL031985.4-201ENST00000642138 673 ntBASIC17.71■□□□□ 0.43
GDF1P27539 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
GDF1P27539 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
GDF1P27539 KRT8P8-201ENST00000434750 1448 ntBASIC17.71■□□□□ 0.43
GDF1P27539 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
GDF1P27539 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GDF1P27539 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GDF1P27539 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
GDF1P27539 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GDF1P27539 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 LINC01521-201ENST00000504184 1943 ntBASIC17.7■□□□□ 0.42
GDF1P27539 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.7■□□□□ 0.42
GDF1P27539 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.7■□□□□ 0.42
GDF1P27539 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.7■□□□□ 0.42
GDF1P27539 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.7■□□□□ 0.42
GDF1P27539 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GDF1P27539 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.7■□□□□ 0.42
GDF1P27539 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.7■□□□□ 0.42
GDF1P27539 AL445675.2-201ENST00000620291 557 ntBASIC17.7■□□□□ 0.42
GDF1P27539 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
GDF1P27539 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GDF1P27539 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GDF1P27539 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
GDF1P27539 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
GDF1P27539 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.69■□□□□ 0.42
GDF1P27539 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
GDF1P27539 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.69■□□□□ 0.42
GDF1P27539 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 TSPY15P-201ENST00000457163 923 ntBASIC17.69■□□□□ 0.42
GDF1P27539 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.69■□□□□ 0.42
GDF1P27539 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.69■□□□□ 0.42
GDF1P27539 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
GDF1P27539 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GDF1P27539 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 AC112907.3-201ENST00000577781 2400 ntBASIC17.69■□□□□ 0.42
GDF1P27539 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GDF1P27539 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 TCF3P1-201ENST00000423021 1937 ntBASIC17.68■□□□□ 0.42
GDF1P27539 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.68■□□□□ 0.42
GDF1P27539 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
GDF1P27539 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
GDF1P27539 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GDF1P27539 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GDF1P27539 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
GDF1P27539 REXO1L12P-201ENST00000622156 912 ntBASIC17.68■□□□□ 0.42
GDF1P27539 AC131212.4-201ENST00000623606 975 ntBASIC17.68■□□□□ 0.42
GDF1P27539 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
GDF1P27539 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GDF1P27539 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GDF1P27539 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GDF1P27539 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.67■□□□□ 0.42
GDF1P27539 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GDF1P27539 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.67■□□□□ 0.42
GDF1P27539 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GDF1P27539 UNC93B2-201ENST00000285383 730 ntBASIC17.67■□□□□ 0.42
GDF1P27539 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GDF1P27539 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.67■□□□□ 0.42
GDF1P27539 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GDF1P27539 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms