Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.6■□□□□ 0.09
ATP6V0CP27449 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ATP6V0CP27449 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ATP6V0CP27449 KRT16P6-202ENST00000425692 1426 ntBASIC15.6■□□□□ 0.09
ATP6V0CP27449 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 Z98044.1-201ENST00000632503 1764 ntBASIC15.59■□□□□ 0.09
ATP6V0CP27449 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 AC091799.1-201ENST00000422823 811 ntBASIC15.59■□□□□ 0.09
ATP6V0CP27449 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.59■□□□□ 0.09
ATP6V0CP27449 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ATP6V0CP27449 KRT87P-202ENST00000534226 1464 ntBASIC15.59■□□□□ 0.09
ATP6V0CP27449 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0CP27449 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0CP27449 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.58■□□□□ 0.09
ATP6V0CP27449 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0CP27449 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ATP6V0CP27449 AC093525.10-201ENST00000625130 1569 ntBASIC15.58■□□□□ 0.09
ATP6V0CP27449 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 AC141586.3-201ENST00000562166 1838 ntBASIC15.58■□□□□ 0.08
ATP6V0CP27449 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 TSPY26P-201ENST00000476365 1326 ntBASIC15.58■□□□□ 0.08
ATP6V0CP27449 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.58■□□□□ 0.08
ATP6V0CP27449 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.58■□□□□ 0.08
ATP6V0CP27449 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ATP6V0CP27449 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ATP6V0CP27449 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATP6V0CP27449 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms