Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.83■□□□□ 0.29
CD40P25942 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CD40P25942 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CD40P25942 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CD40P25942 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD40P25942 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.83■□□□□ 0.28
CD40P25942 MIR1238-201ENST00000408483 83 ntBASIC16.83■□□□□ 0.28
CD40P25942 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.83■□□□□ 0.28
CD40P25942 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CD40P25942 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.83■□□□□ 0.28
CD40P25942 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CD40P25942 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.83■□□□□ 0.28
CD40P25942 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.83■□□□□ 0.28
CD40P25942 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.83■□□□□ 0.28
CD40P25942 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.83■□□□□ 0.28
CD40P25942 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD40P25942 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.83■□□□□ 0.28
CD40P25942 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CD40P25942 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.82■□□□□ 0.28
CD40P25942 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 MESTP1-201ENST00000404287 994 ntBASIC16.82■□□□□ 0.28
CD40P25942 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 B3GAT3P1-201ENST00000471720 806 ntBASIC16.82■□□□□ 0.28
CD40P25942 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.82■□□□□ 0.28
CD40P25942 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.82■□□□□ 0.28
CD40P25942 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.82■□□□□ 0.28
CD40P25942 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD40P25942 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD40P25942 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD40P25942 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 AC011506.1-201ENST00000474329 610 ntBASIC16.81■□□□□ 0.28
CD40P25942 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
CD40P25942 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
CD40P25942 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD40P25942 FITM1-202ENST00000559294 800 ntBASIC16.81■□□□□ 0.28
CD40P25942 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.81■□□□□ 0.28
CD40P25942 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.81■□□□□ 0.28
CD40P25942 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.81■□□□□ 0.28
CD40P25942 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.81■□□□□ 0.28
CD40P25942 AC097493.4-201ENST00000641197 219 ntBASIC16.81■□□□□ 0.28
CD40P25942 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD40P25942 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CD40P25942 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.81■□□□□ 0.28
CD40P25942 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CD40P25942 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD40P25942 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CD40P25942 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.8■□□□□ 0.28
CD40P25942 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.8■□□□□ 0.28
CD40P25942 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CD40P25942 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
CD40P25942 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.8■□□□□ 0.28
CD40P25942 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CD40P25942 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms