Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNFRSF1BP20333 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 AC005181.1-201ENST00000604782 1256 ntBASIC18.11■□□□□ 0.49
TNFRSF1BP20333 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.11■□□□□ 0.49
TNFRSF1BP20333 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNFRSF1BP20333 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 AL161938.1-201ENST00000569833 2180 ntBASIC18.1■□□□□ 0.49
TNFRSF1BP20333 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 GPX1P1-201ENST00000388829 606 ntBASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNFRSF1BP20333 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 LSM12P1-201ENST00000411836 588 ntBASIC18.09■□□□□ 0.49
TNFRSF1BP20333 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.09■□□□□ 0.49
TNFRSF1BP20333 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNFRSF1BP20333 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms