Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CD58P19256 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.94■□□□□ 0.94
CD58P19256 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.94■□□□□ 0.94
CD58P19256 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CD58P19256 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.94■□□□□ 0.94
CD58P19256 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 AC142381.4-202ENST00000563973 229 ntBASIC20.94■□□□□ 0.94
CD58P19256 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CD58P19256 TREX1-205ENST00000625293 1783 ntBASIC20.94■□□□□ 0.94
CD58P19256 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CD58P19256 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CD58P19256 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.93■□□□□ 0.94
CD58P19256 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.93■□□□□ 0.94
CD58P19256 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CD58P19256 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CD58P19256 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.93■□□□□ 0.94
CD58P19256 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CD58P19256 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CD58P19256 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.92■□□□□ 0.94
CD58P19256 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.92■□□□□ 0.94
CD58P19256 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 AC133681.1-201ENST00000465482 601 ntBASIC20.92■□□□□ 0.94
CD58P19256 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CD58P19256 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.92■□□□□ 0.94
CD58P19256 AC110285.5-201ENST00000611501 352 ntBASIC20.92■□□□□ 0.94
CD58P19256 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.92■□□□□ 0.94
CD58P19256 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CD58P19256 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CD58P19256 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CD58P19256 AC007952.6-201ENST00000573168 2673 ntBASIC20.91■□□□□ 0.94
CD58P19256 AC003957.1-201ENST00000625108 2673 ntBASIC20.91■□□□□ 0.94
CD58P19256 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CD58P19256 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CD58P19256 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.91■□□□□ 0.94
CD58P19256 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.91■□□□□ 0.94
CD58P19256 TUBB8P6-201ENST00000436895 1288 ntBASIC20.91■□□□□ 0.94
CD58P19256 GCSHP5-201ENST00000443090 522 ntBASIC20.91■□□□□ 0.94
CD58P19256 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CD58P19256 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 KRT18P16-201ENST00000510337 1294 ntBASIC20.91■□□□□ 0.94
CD58P19256 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.91■□□□□ 0.94
CD58P19256 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.91■□□□□ 0.94
CD58P19256 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.91■□□□□ 0.94
CD58P19256 AC004264.1-201ENST00000608354 794 ntBASIC20.91■□□□□ 0.94
CD58P19256 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CD58P19256 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.91■□□□□ 0.94
CD58P19256 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms