Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.28■□□□□ 0.2
ATF4P18848 AL136967.2-201ENST00000623968 743 ntBASIC16.28■□□□□ 0.2
ATF4P18848 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
ATF4P18848 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATF4P18848 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.28■□□□□ 0.2
ATF4P18848 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATF4P18848 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.27■□□□□ 0.2
ATF4P18848 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ATF4P18848 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 AC026471.6-201ENST00000622954 1905 ntBASIC16.27■□□□□ 0.2
ATF4P18848 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.27■□□□□ 0.2
ATF4P18848 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.27■□□□□ 0.2
ATF4P18848 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ATF4P18848 SERBP1P1-201ENST00000396021 1160 ntBASIC16.27■□□□□ 0.2
ATF4P18848 ZNRF2P3-201ENST00000424200 374 ntBASIC16.27■□□□□ 0.2
ATF4P18848 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.27■□□□□ 0.2
ATF4P18848 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ATF4P18848 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATF4P18848 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
ATF4P18848 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATF4P18848 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ATF4P18848 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATF4P18848 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ATF4P18848 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.26■□□□□ 0.19
ATF4P18848 AP001330.3-201ENST00000520123 633 ntBASIC16.26■□□□□ 0.19
ATF4P18848 AC027682.1-201ENST00000562846 899 ntBASIC16.26■□□□□ 0.19
ATF4P18848 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.26■□□□□ 0.19
ATF4P18848 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.26■□□□□ 0.19
ATF4P18848 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ATF4P18848 AP004607.7-201ENST00000527152 1677 ntBASIC16.26■□□□□ 0.19
ATF4P18848 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ATF4P18848 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.26■□□□□ 0.19
ATF4P18848 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ATF4P18848 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ATF4P18848 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 AC009113.1-201ENST00000570267 2443 ntBASIC16.25■□□□□ 0.19
ATF4P18848 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 NFIC-211ENST00000641145 8399 ntBASIC16.25■□□□□ 0.19
ATF4P18848 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ATF4P18848 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 AF213884.3-201ENST00000563833 479 ntBASIC16.25■□□□□ 0.19
ATF4P18848 RARRES2P6-201ENST00000567333 442 ntBASIC16.25■□□□□ 0.19
ATF4P18848 AC136469.2-201ENST00000623944 1028 ntBASIC16.25■□□□□ 0.19
ATF4P18848 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.25■□□□□ 0.19
ATF4P18848 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ATF4P18848 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.25■□□□□ 0.19
ATF4P18848 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
ATF4P18848 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ATF4P18848 RASA4CP-201ENST00000424092 1398 ntBASIC16.25■□□□□ 0.19
ATF4P18848 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms