Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PTPN1P18031 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPN1P18031 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN1P18031 MIR4785-201ENST00000585005 73 ntBASIC20.69■□□□□ 0.9
PTPN1P18031 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.69■□□□□ 0.9
PTPN1P18031 AC026471.5-201ENST00000615068 467 ntBASIC20.69■□□□□ 0.9
PTPN1P18031 HLA-A-209ENST00000638375 975 ntBASIC20.69■□□□□ 0.9
PTPN1P18031 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPN1P18031 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPN1P18031 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
PTPN1P18031 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPN1P18031 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN1P18031 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN1P18031 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN1P18031 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN1P18031 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN1P18031 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PTPN1P18031 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 AL355355.2-201ENST00000442321 338 ntBASIC20.68■□□□□ 0.9
PTPN1P18031 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.68■□□□□ 0.9
PTPN1P18031 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.68■□□□□ 0.9
PTPN1P18031 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPN1P18031 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPN1P18031 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN1P18031 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTPN1P18031 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PTPN1P18031 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN1P18031 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN1P18031 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPN1P18031 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPN1P18031 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PTPN1P18031 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPN1P18031 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTPN1P18031 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN1P18031 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN1P18031 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PTPN1P18031 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PTPN1P18031 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PTPN1P18031 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPN1P18031 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.66■□□□□ 0.9
PTPN1P18031 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.66■□□□□ 0.9
PTPN1P18031 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.66■□□□□ 0.9
PTPN1P18031 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 NUDT16P1-203ENST00000513809 620 ntBASIC20.66■□□□□ 0.9
PTPN1P18031 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.66■□□□□ 0.9
PTPN1P18031 AP003071.4-201ENST00000562276 1284 ntBASIC20.66■□□□□ 0.9
PTPN1P18031 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.66■□□□□ 0.9
PTPN1P18031 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN1P18031 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPN1P18031 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN1P18031 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN1P18031 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN1P18031 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN1P18031 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN1P18031 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN1P18031 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN1P18031 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPN1P18031 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN1P18031 AL031985.4-201ENST00000642138 673 ntBASIC20.65■□□□□ 0.9
PTPN1P18031 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PTPN1P18031 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN1P18031 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN1P18031 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN1P18031 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN1P18031 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms