Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TPRP12270 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.33■□□□□ 0.53
TPRP12270 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TPRP12270 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.33■□□□□ 0.53
TPRP12270 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
TPRP12270 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
TPRP12270 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.33■□□□□ 0.52
TPRP12270 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
TPRP12270 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.33■□□□□ 0.52
TPRP12270 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TPRP12270 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.32■□□□□ 0.52
TPRP12270 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 C9orf163-202ENST00000624034 2573 ntBASIC18.32■□□□□ 0.52
TPRP12270 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.32■□□□□ 0.52
TPRP12270 REXO1L6P-202ENST00000619970 1078 ntBASIC18.32■□□□□ 0.52
TPRP12270 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.32■□□□□ 0.52
TPRP12270 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.32■□□□□ 0.52
TPRP12270 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.32■□□□□ 0.52
TPRP12270 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.32■□□□□ 0.52
TPRP12270 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
TPRP12270 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.32■□□□□ 0.52
TPRP12270 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.32■□□□□ 0.52
TPRP12270 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TPRP12270 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TPRP12270 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.32■□□□□ 0.52
TPRP12270 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
TPRP12270 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.31■□□□□ 0.52
TPRP12270 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.31■□□□□ 0.52
TPRP12270 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 CYMP-203ENST00000474680 1263 ntBASIC18.31■□□□□ 0.52
TPRP12270 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
TPRP12270 AP001005.1-201ENST00000571755 1248 ntBASIC18.31■□□□□ 0.52
TPRP12270 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.31■□□□□ 0.52
TPRP12270 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TPRP12270 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TPRP12270 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TPRP12270 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.31■□□□□ 0.52
TPRP12270 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.3■□□□□ 0.52
TPRP12270 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.3■□□□□ 0.52
TPRP12270 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPRP12270 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 RPS8P6-201ENST00000426177 609 ntBASIC18.3■□□□□ 0.52
TPRP12270 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.3■□□□□ 0.52
TPRP12270 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.3■□□□□ 0.52
TPRP12270 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.3■□□□□ 0.52
TPRP12270 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.3■□□□□ 0.52
TPRP12270 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPRP12270 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.29■□□□□ 0.52
TPRP12270 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPRP12270 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TPRP12270 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.29■□□□□ 0.52
TPRP12270 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPRP12270 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TPRP12270 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPRP12270 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.29■□□□□ 0.52
TPRP12270 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.29■□□□□ 0.52
TPRP12270 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TPRP12270 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.29■□□□□ 0.52
TPRP12270 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
TPRP12270 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TPRP12270 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPRP12270 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms