Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.27■□□□□ 0.68
COL6A2P12110 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
COL6A2P12110 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL6A2P12110 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL6A2P12110 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL6A2P12110 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.27■□□□□ 0.68
COL6A2P12110 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL6A2P12110 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.27■□□□□ 0.68
COL6A2P12110 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL6A2P12110 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COL6A2P12110 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.27■□□□□ 0.67
COL6A2P12110 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL6A2P12110 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL6A2P12110 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
COL6A2P12110 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COL6A2P12110 BX276092.2-201ENST00000417668 665 ntBASIC19.26■□□□□ 0.67
COL6A2P12110 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 AC105036.2-201ENST00000569468 176 ntBASIC19.26■□□□□ 0.67
COL6A2P12110 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 AC080038.1-201ENST00000611274 1154 ntBASIC19.26■□□□□ 0.67
COL6A2P12110 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
COL6A2P12110 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.26■□□□□ 0.67
COL6A2P12110 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
COL6A2P12110 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.26■□□□□ 0.67
COL6A2P12110 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL6A2P12110 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.25■□□□□ 0.67
COL6A2P12110 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 ZNF815P-204ENST00000434898 1737 ntBASIC19.25■□□□□ 0.67
COL6A2P12110 AL138781.2-201ENST00000617896 1843 ntBASIC19.25■□□□□ 0.67
COL6A2P12110 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COL6A2P12110 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.25■□□□□ 0.67
COL6A2P12110 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.25■□□□□ 0.67
COL6A2P12110 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.25■□□□□ 0.67
COL6A2P12110 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.25■□□□□ 0.67
COL6A2P12110 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
COL6A2P12110 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COL6A2P12110 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.25■□□□□ 0.67
COL6A2P12110 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
COL6A2P12110 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
COL6A2P12110 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.24■□□□□ 0.67
COL6A2P12110 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.24■□□□□ 0.67
COL6A2P12110 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 AC073111.5-205ENST00000641717 521 ntBASIC19.24■□□□□ 0.67
COL6A2P12110 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COL6A2P12110 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COL6A2P12110 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COL6A2P12110 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COL6A2P12110 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
COL6A2P12110 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.23■□□□□ 0.67
COL6A2P12110 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.23■□□□□ 0.67
COL6A2P12110 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
COL6A2P12110 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.23■□□□□ 0.67
COL6A2P12110 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.23■□□□□ 0.67
COL6A2P12110 AL050303.2-201ENST00000619798 666 ntBASIC19.23■□□□□ 0.67
COL6A2P12110 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 AL161938.1-201ENST00000569833 2180 ntBASIC19.23■□□□□ 0.67
COL6A2P12110 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
COL6A2P12110 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
COL6A2P12110 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms