Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.77■□□□□ 0.44
HIST1H2ABP04908 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 TSPY6P-201ENST00000448518 926 ntBASIC17.77■□□□□ 0.44
HIST1H2ABP04908 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 AC091874.3-201ENST00000512672 1195 ntBASIC17.77■□□□□ 0.44
HIST1H2ABP04908 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
HIST1H2ABP04908 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HIST1H2ABP04908 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST1H2ABP04908 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.75■□□□□ 0.43
HIST1H2ABP04908 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST1H2ABP04908 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST1H2ABP04908 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms