Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.33■■□□□ 1.17
ALDH1A1P00352 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.33■■□□□ 1.17
ALDH1A1P00352 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ALDH1A1P00352 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ALDH1A1P00352 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ALDH1A1P00352 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.33■■□□□ 1.16
ALDH1A1P00352 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
ALDH1A1P00352 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 Z98882.1-201ENST00000622160 2253 ntBASIC22.32■■□□□ 1.16
ALDH1A1P00352 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.32■■□□□ 1.16
ALDH1A1P00352 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ALDH1A1P00352 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.31■■□□□ 1.16
ALDH1A1P00352 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ALDH1A1P00352 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.3■■□□□ 1.16
ALDH1A1P00352 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
ALDH1A1P00352 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.3■■□□□ 1.16
ALDH1A1P00352 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 AL022342.1-201ENST00000400363 863 ntBASIC22.3■■□□□ 1.16
ALDH1A1P00352 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 AC034232.1-201ENST00000506026 1064 ntBASIC22.3■■□□□ 1.16
ALDH1A1P00352 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.3■■□□□ 1.16
ALDH1A1P00352 MIR3180-1-201ENST00000580374 94 ntBASIC22.3■■□□□ 1.16
ALDH1A1P00352 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.3■■□□□ 1.16
ALDH1A1P00352 MIR3180-3-201ENST00000584616 94 ntBASIC22.3■■□□□ 1.16
ALDH1A1P00352 AC011498.5-201ENST00000592027 486 ntBASIC22.3■■□□□ 1.16
ALDH1A1P00352 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ALDH1A1P00352 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A1P00352 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A1P00352 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A1P00352 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A1P00352 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ALDH1A1P00352 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ALDH1A1P00352 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 AC016734.2-201ENST00000624325 1377 ntBASIC22.28■■□□□ 1.16
ALDH1A1P00352 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
ALDH1A1P00352 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ALDH1A1P00352 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ALDH1A1P00352 KRT8P41-201ENST00000533985 1514 ntBASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms