Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GGPS1O95749 AL691432.2-201ENST00000607222 2038 ntBASIC21.94■■□□□ 1.1
GGPS1O95749 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.94■■□□□ 1.1
GGPS1O95749 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.93■■□□□ 1.1
GGPS1O95749 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
GGPS1O95749 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.93■■□□□ 1.1
GGPS1O95749 KRT18P22-201ENST00000402024 1347 ntBASIC21.93■■□□□ 1.1
GGPS1O95749 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.93■■□□□ 1.1
GGPS1O95749 AC097488.1-201ENST00000507834 756 ntBASIC21.93■■□□□ 1.1
GGPS1O95749 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
GGPS1O95749 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.93■■□□□ 1.1
GGPS1O95749 AP005242.2-201ENST00000580065 1175 ntBASIC21.93■■□□□ 1.1
GGPS1O95749 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
GGPS1O95749 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
GGPS1O95749 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GGPS1O95749 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 AL162377.1-201ENST00000618844 1793 ntBASIC21.92■■□□□ 1.1
GGPS1O95749 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
GGPS1O95749 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GGPS1O95749 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GGPS1O95749 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.92■■□□□ 1.1
GGPS1O95749 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
GGPS1O95749 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 AC005521.1-201ENST00000393351 872 ntBASIC21.92■■□□□ 1.1
GGPS1O95749 CRYGFP-201ENST00000418459 633 ntBASIC21.92■■□□□ 1.1
GGPS1O95749 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.92■■□□□ 1.1
GGPS1O95749 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
GGPS1O95749 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.92■■□□□ 1.1
GGPS1O95749 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.92■■□□□ 1.1
GGPS1O95749 AC011298.2-201ENST00000617989 482 ntBASIC21.92■■□□□ 1.1
GGPS1O95749 AC130371.2-201ENST00000619443 611 ntBASIC21.92■■□□□ 1.1
GGPS1O95749 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GGPS1O95749 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
GGPS1O95749 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.91■■□□□ 1.1
GGPS1O95749 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.91■■□□□ 1.1
GGPS1O95749 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
GGPS1O95749 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.91■■□□□ 1.1
GGPS1O95749 AC008040.2-201ENST00000461049 708 ntBASIC21.91■■□□□ 1.1
GGPS1O95749 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.91■■□□□ 1.1
GGPS1O95749 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.91■■□□□ 1.1
GGPS1O95749 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.91■■□□□ 1.1
GGPS1O95749 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GGPS1O95749 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
GGPS1O95749 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.91■■□□□ 1.1
GGPS1O95749 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.91■■□□□ 1.1
GGPS1O95749 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 GABARAPL3-202ENST00000624044 1851 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 AC113347.1-201ENST00000413321 391 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 AC004951.3-201ENST00000418645 1148 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.9■■□□□ 1.1
GGPS1O95749 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 SLC25A1P4-201ENST00000567977 778 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
GGPS1O95749 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 AC092865.7-201ENST00000641832 219 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
GGPS1O95749 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GGPS1O95749 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 AC092667.1-201ENST00000434301 2586 ntBASIC21.9■■□□□ 1.1
GGPS1O95749 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GGPS1O95749 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
GGPS1O95749 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GGPS1O95749 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.89■■□□□ 1.09
GGPS1O95749 C2orf69P3-201ENST00000565542 1120 ntBASIC21.89■■□□□ 1.09
GGPS1O95749 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.89■■□□□ 1.09
GGPS1O95749 AP000692.2-201ENST00000608391 879 ntBASIC21.89■■□□□ 1.09
GGPS1O95749 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.89■■□□□ 1.09
GGPS1O95749 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GGPS1O95749 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GGPS1O95749 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.89■■□□□ 1.09
GGPS1O95749 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GGPS1O95749 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.88■■□□□ 1.09
GGPS1O95749 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GGPS1O95749 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms