Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 AC008403.3-201ENST00000598924 454 ntBASIC18.37■□□□□ 0.53
PLOD3O60568 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
PLOD3O60568 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.37■□□□□ 0.53
PLOD3O60568 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.37■□□□□ 0.53
PLOD3O60568 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.37■□□□□ 0.53
PLOD3O60568 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PLOD3O60568 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PLOD3O60568 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 POM121L13P-201ENST00000422362 380 ntBASIC18.36■□□□□ 0.53
PLOD3O60568 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.36■□□□□ 0.53
PLOD3O60568 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.36■□□□□ 0.53
PLOD3O60568 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.36■□□□□ 0.53
PLOD3O60568 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.36■□□□□ 0.53
PLOD3O60568 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PLOD3O60568 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.36■□□□□ 0.53
PLOD3O60568 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.35■□□□□ 0.53
PLOD3O60568 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PLOD3O60568 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.35■□□□□ 0.53
PLOD3O60568 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.35■□□□□ 0.53
PLOD3O60568 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.35■□□□□ 0.53
PLOD3O60568 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PLOD3O60568 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.35■□□□□ 0.53
PLOD3O60568 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PLOD3O60568 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.35■□□□□ 0.53
PLOD3O60568 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PLOD3O60568 AP003097.1-201ENST00000530657 1135 ntBASIC18.35■□□□□ 0.53
PLOD3O60568 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PLOD3O60568 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.35■□□□□ 0.53
PLOD3O60568 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.35■□□□□ 0.53
PLOD3O60568 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.35■□□□□ 0.53
PLOD3O60568 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PLOD3O60568 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PLOD3O60568 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PLOD3O60568 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.34■□□□□ 0.53
PLOD3O60568 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.34■□□□□ 0.53
PLOD3O60568 AC026366.1-201ENST00000488803 879 ntBASIC18.34■□□□□ 0.53
PLOD3O60568 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.34■□□□□ 0.53
PLOD3O60568 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.34■□□□□ 0.53
PLOD3O60568 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PLOD3O60568 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.34■□□□□ 0.53
PLOD3O60568 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PLOD3O60568 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
PLOD3O60568 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
PLOD3O60568 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.33■□□□□ 0.53
PLOD3O60568 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
PLOD3O60568 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.33■□□□□ 0.53
PLOD3O60568 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PLOD3O60568 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PLOD3O60568 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PLOD3O60568 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.33■□□□□ 0.52
PLOD3O60568 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PLOD3O60568 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms