Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 AC092338.2-201ENST00000568827 1415 ntBASIC18.44■□□□□ 0.54
URB1O60287 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.44■□□□□ 0.54
URB1O60287 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.44■□□□□ 0.54
URB1O60287 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
URB1O60287 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
URB1O60287 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
URB1O60287 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.43■□□□□ 0.54
URB1O60287 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.43■□□□□ 0.54
URB1O60287 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.43■□□□□ 0.54
URB1O60287 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
URB1O60287 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.43■□□□□ 0.54
URB1O60287 AF106564.1-201ENST00000607058 2553 ntBASIC18.43■□□□□ 0.54
URB1O60287 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
URB1O60287 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.43■□□□□ 0.54
URB1O60287 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
URB1O60287 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.43■□□□□ 0.54
URB1O60287 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
URB1O60287 AL512604.3-201ENST00000569583 964 ntBASIC18.43■□□□□ 0.54
URB1O60287 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.43■□□□□ 0.54
URB1O60287 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.43■□□□□ 0.54
URB1O60287 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
URB1O60287 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 AC008040.2-201ENST00000461049 708 ntBASIC18.42■□□□□ 0.54
URB1O60287 VENTXP5-201ENST00000523979 775 ntBASIC18.42■□□□□ 0.54
URB1O60287 MIR3652-201ENST00000579335 131 ntBASIC18.42■□□□□ 0.54
URB1O60287 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.42■□□□□ 0.54
URB1O60287 HYMAI.1-201ENST00000620949 238 ntBASIC18.42■□□□□ 0.54
URB1O60287 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.42■□□□□ 0.54
URB1O60287 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
URB1O60287 SLC25A1P2-201ENST00000430693 912 ntBASIC18.42■□□□□ 0.54
URB1O60287 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.42■□□□□ 0.54
URB1O60287 MIR2861-201ENST00000636310 90 ntBASIC18.42■□□□□ 0.54
URB1O60287 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
URB1O60287 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.41■□□□□ 0.54
URB1O60287 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
URB1O60287 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.41■□□□□ 0.54
URB1O60287 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
URB1O60287 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
URB1O60287 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.41■□□□□ 0.54
URB1O60287 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
URB1O60287 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.41■□□□□ 0.54
URB1O60287 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 CKBP1-201ENST00000565489 1086 ntBASIC18.41■□□□□ 0.54
URB1O60287 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.41■□□□□ 0.54
URB1O60287 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
URB1O60287 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
URB1O60287 ATP5G2P1-201ENST00000433580 426 ntBASIC18.4■□□□□ 0.54
URB1O60287 KRT17P6-201ENST00000453795 1220 ntBASIC18.4■□□□□ 0.54
URB1O60287 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.4■□□□□ 0.54
URB1O60287 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.4■□□□□ 0.54
URB1O60287 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.4■□□□□ 0.54
URB1O60287 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.4■□□□□ 0.54
URB1O60287 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
URB1O60287 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
URB1O60287 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms