Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 HLA-A-209ENST00000638375 975 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 KRT17P2-201ENST00000300992 1314 ntBASIC19.18■□□□□ 0.66
VEGFDO43915 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.18■□□□□ 0.66
VEGFDO43915 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.18■□□□□ 0.66
VEGFDO43915 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.18■□□□□ 0.66
VEGFDO43915 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VEGFDO43915 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.17■□□□□ 0.66
VEGFDO43915 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.17■□□□□ 0.66
VEGFDO43915 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
VEGFDO43915 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.17■□□□□ 0.66
VEGFDO43915 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.17■□□□□ 0.66
VEGFDO43915 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VEGFDO43915 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.17■□□□□ 0.66
VEGFDO43915 MIR4785-201ENST00000585005 73 ntBASIC19.17■□□□□ 0.66
VEGFDO43915 AC131212.4-201ENST00000623606 975 ntBASIC19.17■□□□□ 0.66
VEGFDO43915 AL031985.4-201ENST00000642138 673 ntBASIC19.17■□□□□ 0.66
VEGFDO43915 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.17■□□□□ 0.66
VEGFDO43915 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.17■□□□□ 0.66
VEGFDO43915 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
VEGFDO43915 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
VEGFDO43915 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VEGFDO43915 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
VEGFDO43915 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFDO43915 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VEGFDO43915 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.16■□□□□ 0.66
VEGFDO43915 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.16■□□□□ 0.66
VEGFDO43915 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 AC026271.3-201ENST00000571884 352 ntBASIC19.16■□□□□ 0.66
VEGFDO43915 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.16■□□□□ 0.66
VEGFDO43915 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VEGFDO43915 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VEGFDO43915 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.15■□□□□ 0.66
VEGFDO43915 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
VEGFDO43915 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.15■□□□□ 0.66
VEGFDO43915 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 TSPY7P-201ENST00000431358 1114 ntBASIC19.15■□□□□ 0.66
VEGFDO43915 AL355355.2-201ENST00000442321 338 ntBASIC19.15■□□□□ 0.66
VEGFDO43915 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.15■□□□□ 0.66
VEGFDO43915 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
VEGFDO43915 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.15■□□□□ 0.66
VEGFDO43915 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.15■□□□□ 0.66
VEGFDO43915 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.15■□□□□ 0.66
VEGFDO43915 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.15■□□□□ 0.66
VEGFDO43915 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VEGFDO43915 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VEGFDO43915 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
VEGFDO43915 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
VEGFDO43915 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.14■□□□□ 0.66
VEGFDO43915 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VEGFDO43915 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms