Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.77■□□□□ 0.6
PRICKLE3O43900 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRICKLE3O43900 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 HLA-A-209ENST00000638375 975 ntBASIC18.77■□□□□ 0.6
PRICKLE3O43900 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
PRICKLE3O43900 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE3O43900 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
PRICKLE3O43900 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PRICKLE3O43900 AFG3L1P-217ENST00000557444 2447 ntBASIC18.76■□□□□ 0.59
PRICKLE3O43900 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 RPS2P4-201ENST00000476944 856 ntBASIC18.76■□□□□ 0.59
PRICKLE3O43900 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 AC073195.1-201ENST00000607241 877 ntBASIC18.76■□□□□ 0.59
PRICKLE3O43900 AC113410.3-201ENST00000623366 203 ntBASIC18.76■□□□□ 0.59
PRICKLE3O43900 AL049637.2-201ENST00000641778 930 ntBASIC18.76■□□□□ 0.59
PRICKLE3O43900 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRICKLE3O43900 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.76■□□□□ 0.59
PRICKLE3O43900 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 KSR1P1-201ENST00000446298 240 ntBASIC18.75■□□□□ 0.59
PRICKLE3O43900 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 AP002982.1-201ENST00000492365 877 ntBASIC18.75■□□□□ 0.59
PRICKLE3O43900 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.75■□□□□ 0.59
PRICKLE3O43900 AL445675.2-201ENST00000620291 557 ntBASIC18.75■□□□□ 0.59
PRICKLE3O43900 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRICKLE3O43900 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.74■□□□□ 0.59
PRICKLE3O43900 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 MIR718-201ENST00000390190 70 ntBASIC18.74■□□□□ 0.59
PRICKLE3O43900 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRICKLE3O43900 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRICKLE3O43900 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.73■□□□□ 0.59
PRICKLE3O43900 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRICKLE3O43900 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.73■□□□□ 0.59
PRICKLE3O43900 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRICKLE3O43900 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRICKLE3O43900 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms