Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.52■□□□□ 0.72
LDB2O43679 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.52■□□□□ 0.72
LDB2O43679 AC006058.3-201ENST00000606217 1069 ntBASIC19.52■□□□□ 0.72
LDB2O43679 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.52■□□□□ 0.72
LDB2O43679 AC073648.6-201ENST00000641589 218 ntBASIC19.52■□□□□ 0.72
LDB2O43679 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
LDB2O43679 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LDB2O43679 NBPF21P-201ENST00000425093 1451 ntBASIC19.52■□□□□ 0.72
LDB2O43679 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
LDB2O43679 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LDB2O43679 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LDB2O43679 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
LDB2O43679 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
LDB2O43679 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.52■□□□□ 0.71
LDB2O43679 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LDB2O43679 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LDB2O43679 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LDB2O43679 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
LDB2O43679 TUBB8P6-201ENST00000436895 1288 ntBASIC19.51■□□□□ 0.71
LDB2O43679 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.51■□□□□ 0.71
LDB2O43679 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.51■□□□□ 0.71
LDB2O43679 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB2O43679 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LDB2O43679 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LDB2O43679 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.51■□□□□ 0.71
LDB2O43679 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.51■□□□□ 0.71
LDB2O43679 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LDB2O43679 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.5■□□□□ 0.71
LDB2O43679 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LDB2O43679 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LDB2O43679 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LDB2O43679 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.5■□□□□ 0.71
LDB2O43679 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.5■□□□□ 0.71
LDB2O43679 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.5■□□□□ 0.71
LDB2O43679 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.5■□□□□ 0.71
LDB2O43679 AL023875.1-201ENST00000640777 796 ntBASIC19.5■□□□□ 0.71
LDB2O43679 ZNF815P-204ENST00000434898 1737 ntBASIC19.5■□□□□ 0.71
LDB2O43679 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 AL032819.2-201ENST00000624543 2162 ntBASIC19.5■□□□□ 0.71
LDB2O43679 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LDB2O43679 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.49■□□□□ 0.71
LDB2O43679 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LDB2O43679 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.49■□□□□ 0.71
LDB2O43679 AC128676.1-201ENST00000454392 318 ntBASIC19.49■□□□□ 0.71
LDB2O43679 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.49■□□□□ 0.71
LDB2O43679 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 RN7SL471P-201ENST00000580476 299 ntBASIC19.49■□□□□ 0.71
LDB2O43679 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LDB2O43679 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.48■□□□□ 0.71
LDB2O43679 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
LDB2O43679 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LDB2O43679 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms