Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXA2O43364 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA2O43364 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HOXA2O43364 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA2O43364 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
HOXA2O43364 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HOXA2O43364 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 FEM1AP1-201ENST00000431297 1995 ntBASIC20.91■□□□□ 0.94
HOXA2O43364 COX11P1-201ENST00000489116 835 ntBASIC20.91■□□□□ 0.94
HOXA2O43364 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXA2O43364 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA2O43364 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
HOXA2O43364 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HOXA2O43364 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXA2O43364 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 FAM8A6P-201ENST00000407496 1135 ntBASIC20.9■□□□□ 0.94
HOXA2O43364 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXA2O43364 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXA2O43364 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
HOXA2O43364 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 AC139887.4-201ENST00000607877 719 ntBASIC20.9■□□□□ 0.94
HOXA2O43364 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 AL031432.5-201ENST00000641059 760 ntBASIC20.9■□□□□ 0.94
HOXA2O43364 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA2O43364 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA2O43364 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA2O43364 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA2O43364 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.89■□□□□ 0.94
HOXA2O43364 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXA2O43364 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA2O43364 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA2O43364 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA2O43364 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.89■□□□□ 0.93
HOXA2O43364 CKBP1-201ENST00000565489 1086 ntBASIC20.89■□□□□ 0.93
HOXA2O43364 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXA2O43364 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXA2O43364 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.89■□□□□ 0.93
HOXA2O43364 AC141257.4-201ENST00000634557 245 ntBASIC20.89■□□□□ 0.93
HOXA2O43364 AC136944.6-201ENST00000634818 245 ntBASIC20.89■□□□□ 0.93
HOXA2O43364 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA2O43364 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
HOXA2O43364 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXA2O43364 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA2O43364 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA2O43364 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA2O43364 AC009237.14-201ENST00000609975 1594 ntBASIC20.89■□□□□ 0.93
HOXA2O43364 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HOXA2O43364 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.88■□□□□ 0.93
HOXA2O43364 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA2O43364 AC092647.4-201ENST00000457211 535 ntBASIC20.88■□□□□ 0.93
HOXA2O43364 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 YBX1P2-201ENST00000489612 999 ntBASIC20.88■□□□□ 0.93
HOXA2O43364 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA2O43364 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 AC091076.1-201ENST00000610741 619 ntBASIC20.88■□□□□ 0.93
HOXA2O43364 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA2O43364 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HOXA2O43364 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA2O43364 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA2O43364 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
HOXA2O43364 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms