Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 KRT8P8-201ENST00000434750 1448 ntBASIC20.29■□□□□ 0.84
MSI1O43347 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.29■□□□□ 0.84
MSI1O43347 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.29■□□□□ 0.84
MSI1O43347 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.29■□□□□ 0.84
MSI1O43347 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.29■□□□□ 0.84
MSI1O43347 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MSI1O43347 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.29■□□□□ 0.84
MSI1O43347 AC073195.1-201ENST00000607241 877 ntBASIC20.29■□□□□ 0.84
MSI1O43347 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MSI1O43347 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.29■□□□□ 0.84
MSI1O43347 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
MSI1O43347 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MSI1O43347 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MSI1O43347 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
MSI1O43347 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.28■□□□□ 0.84
MSI1O43347 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.28■□□□□ 0.84
MSI1O43347 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.28■□□□□ 0.84
MSI1O43347 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 CR392000.1-201ENST00000624770 1228 ntBASIC20.28■□□□□ 0.84
MSI1O43347 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
MSI1O43347 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.28■□□□□ 0.84
MSI1O43347 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.28■□□□□ 0.84
MSI1O43347 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSI1O43347 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MSI1O43347 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
MSI1O43347 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.27■□□□□ 0.84
MSI1O43347 HLA-A-209ENST00000638375 975 ntBASIC20.27■□□□□ 0.84
MSI1O43347 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MSI1O43347 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MSI1O43347 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MSI1O43347 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MSI1O43347 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MSI1O43347 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MSI1O43347 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
MSI1O43347 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
MSI1O43347 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 LINC01465-201ENST00000408887 1940 ntBASIC20.26■□□□□ 0.83
MSI1O43347 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.26■□□□□ 0.83
MSI1O43347 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
MSI1O43347 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSI1O43347 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.26■□□□□ 0.83
MSI1O43347 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MSI1O43347 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.25■□□□□ 0.83
MSI1O43347 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSI1O43347 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSI1O43347 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSI1O43347 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSI1O43347 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms