Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF1O43189 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 AC012618.2-201ENST00000428058 849 ntBASIC16.82■□□□□ 0.28
PHF1O43189 TSPY7P-201ENST00000431358 1114 ntBASIC16.82■□□□□ 0.28
PHF1O43189 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.82■□□□□ 0.28
PHF1O43189 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 AC233263.1-201ENST00000578059 224 ntBASIC16.82■□□□□ 0.28
PHF1O43189 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.82■□□□□ 0.28
PHF1O43189 MIR2861-201ENST00000636310 90 ntBASIC16.82■□□□□ 0.28
PHF1O43189 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PHF1O43189 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHF1O43189 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.82■□□□□ 0.28
PHF1O43189 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHF1O43189 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PHF1O43189 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PHF1O43189 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.81■□□□□ 0.28
PHF1O43189 AC018445.3-201ENST00000624177 1945 ntBASIC16.81■□□□□ 0.28
PHF1O43189 RCN1P1-201ENST00000400413 996 ntBASIC16.81■□□□□ 0.28
PHF1O43189 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 SOX15-203ENST00000570788 1093 ntBASIC16.81■□□□□ 0.28
PHF1O43189 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PHF1O43189 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHF1O43189 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHF1O43189 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PHF1O43189 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PHF1O43189 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PHF1O43189 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHF1O43189 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PHF1O43189 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.8■□□□□ 0.28
PHF1O43189 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.8■□□□□ 0.28
PHF1O43189 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 AC069544.1-201ENST00000609399 999 ntBASIC16.8■□□□□ 0.28
PHF1O43189 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PHF1O43189 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.8■□□□□ 0.28
PHF1O43189 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PHF1O43189 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHF1O43189 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PHF1O43189 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms