Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.68■□□□□ 0.42
SMAD9O15198 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMAD9O15198 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SMAD9O15198 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SMAD9O15198 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.67■□□□□ 0.42
SMAD9O15198 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.67■□□□□ 0.42
SMAD9O15198 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.67■□□□□ 0.42
SMAD9O15198 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.67■□□□□ 0.42
SMAD9O15198 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 RN7SL471P-201ENST00000580476 299 ntBASIC17.67■□□□□ 0.42
SMAD9O15198 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMAD9O15198 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SMAD9O15198 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.67■□□□□ 0.42
SMAD9O15198 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMAD9O15198 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMAD9O15198 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD9O15198 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD9O15198 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.66■□□□□ 0.42
SMAD9O15198 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SMAD9O15198 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 TFP1-202ENST00000475455 1573 ntBASIC17.66■□□□□ 0.42
SMAD9O15198 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SMAD9O15198 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMAD9O15198 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD9O15198 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMAD9O15198 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SMAD9O15198 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMAD9O15198 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.65■□□□□ 0.42
SMAD9O15198 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD9O15198 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SMAD9O15198 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.65■□□□□ 0.42
SMAD9O15198 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.65■□□□□ 0.42
SMAD9O15198 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 HCG11-201ENST00000411553 5696 ntBASIC17.65■□□□□ 0.42
SMAD9O15198 AP001271.2-201ENST00000624018 1556 ntBASIC17.65■□□□□ 0.42
SMAD9O15198 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMAD9O15198 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.64■□□□□ 0.42
SMAD9O15198 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMAD9O15198 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD9O15198 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD9O15198 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMAD9O15198 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms