Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH17O14917 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH17O14917 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH17O14917 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH17O14917 AL353807.1-201ENST00000427475 662 ntBASIC18.62■□□□□ 0.57
PCDH17O14917 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH17O14917 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 AC004264.1-201ENST00000608354 794 ntBASIC18.62■□□□□ 0.57
PCDH17O14917 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH17O14917 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH17O14917 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH17O14917 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH17O14917 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDH17O14917 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH17O14917 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDH17O14917 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH17O14917 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH17O14917 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDH17O14917 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDH17O14917 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDH17O14917 KRT16P5-201ENST00000455284 522 ntBASIC18.61■□□□□ 0.57
PCDH17O14917 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH17O14917 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH17O14917 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 AC233702.5-201ENST00000584107 538 ntBASIC18.61■□□□□ 0.57
PCDH17O14917 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH17O14917 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH17O14917 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH17O14917 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDH17O14917 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH17O14917 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH17O14917 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH17O14917 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH17O14917 AL691432.2-201ENST00000607222 2038 ntBASIC18.6■□□□□ 0.57
PCDH17O14917 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH17O14917 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDH17O14917 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH17O14917 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH17O14917 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH17O14917 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDH17O14917 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 NBPF21P-201ENST00000425093 1451 ntBASIC18.59■□□□□ 0.57
PCDH17O14917 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH17O14917 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH17O14917 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH17O14917 RPS2P55-201ENST00000397318 883 ntBASIC18.59■□□□□ 0.57
PCDH17O14917 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH17O14917 AC107956.1-201ENST00000494359 873 ntBASIC18.59■□□□□ 0.57
PCDH17O14917 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH17O14917 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH17O14917 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms