Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC099778.1-201ENST00000568593 1911 ntBASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC097488.1-201ENST00000507834 756 ntBASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KRT8P9-201ENST00000558927 1449 ntBASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL160286.2-201ENST00000567150 934 ntBASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC130371.2-201ENST00000619443 611 ntBASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 LINC01568-207ENST00000641790 1380 ntBASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.54■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CRYGFP-201ENST00000418459 633 ntBASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM207BP-201ENST00000447172 505 ntBASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KRT18P21-201ENST00000515767 1272 ntBASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AP000692.2-201ENST00000608391 879 ntBASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 LINC01006-201ENST00000333319 2292 ntBASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.52■□□□□ 0.72
C1QTNF3-AMACRE9PGA6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.52■□□□□ 0.71
C1QTNF3-AMACRE9PGA6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms