Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.85■■□□□ 1.25
SSC5DA1L4H1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SSC5DA1L4H1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SSC5DA1L4H1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.85■■□□□ 1.25
SSC5DA1L4H1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SSC5DA1L4H1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SSC5DA1L4H1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 FEM1AP1-201ENST00000431297 1995 ntBASIC22.83■■□□□ 1.25
SSC5DA1L4H1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.83■■□□□ 1.25
SSC5DA1L4H1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SSC5DA1L4H1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 ZNF444P1-201ENST00000559497 298 ntBASIC22.82■■□□□ 1.24
SSC5DA1L4H1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SSC5DA1L4H1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 TSPY21P-201ENST00000433481 731 ntBASIC22.81■■□□□ 1.24
SSC5DA1L4H1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.81■■□□□ 1.24
SSC5DA1L4H1 TSPY23P-201ENST00000440136 739 ntBASIC22.81■■□□□ 1.24
SSC5DA1L4H1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
SSC5DA1L4H1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 MIR4674-201ENST00000582457 87 ntBASIC22.8■■□□□ 1.24
SSC5DA1L4H1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SSC5DA1L4H1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms