Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC239809.2-201ENST00000415381 517 ntBASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL596275.1-201ENST00000423464 877 ntBASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL023875.1-201ENST00000640777 796 ntBASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.68■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PRKY-204ENST00000533551 1019 ntBASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MTDHP1-201ENST00000605323 784 ntBASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TCRBV4S1A1TA0A5B7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms